starting integration

/target/

dependency-reduced-pom.xml

.project

.classpath

.settings

 No newline at end of file

image: maven:3.6.2-jdk-8

build:

  stage: build

  script:

    - mvn package

  artifacts:

    paths:

      - target/sarefPipeline.jar

  only:

    - master 

# Description

This project integrates the SAREF development and documentation generation pipeline

<project xmlns="http://maven.apache.org/POM/4.0.0"

	xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"

	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">

	<modelVersion>4.0.0</modelVersion>

	<groupId>fr.emse.gitlab.saref</groupId>

	<artifactId>saref-pipeline</artifactId>

	<version>1.0-SNAPSHOT</version>

	<name>saref-pipeline</name>

	<developers>

		<developer>

			<name>Omar Qawasmeh</name>

			<email>omar.alqawasmeh@emse.fr</email>

			<url>https://perso.univ-st-etienne.fr/alo09685/</url>

			<organization>Ecole des mines de Saint-Etienne</organization>

			<organizationUrl>http://www.mines-stetienne.fr/</organizationUrl>

			<timezone>+1</timezone>

		</developer>

		<developer>

			<name>Maxime Lefrançois</name>

			<email>maxime.lefrancois@emse.fr</email>

			<url>http://www.maxime-lefrancois.info/</url>

			<organization>Ecole des mines de Saint-Etienne</organization>

			<organizationUrl>http://www.mines-stetienne.fr/</organizationUrl>

			<timezone>+1</timezone>

		</developer>

	</developers>

	<organization>

		<name>École des Mines de Saint-Étienne</name>

		<url>http://www.mines-stetienne.fr/</url>

	</organization>

	<licenses>

		<license>

			<name>The Apache Software License, Version 2.0</name>

			<url>http://www.apache.org/licenses/LICENSE-2.0.txt</url>

		</license>

	</licenses>

	<properties>

		<maven.compiler.source>1.8</maven.compiler.source>

		<maven.compiler.target>1.8</maven.compiler.target>

		<maven.build.timestamp.format>yyyy-MM-dd'T'HH:mm:ssZ</maven.build.timestamp.format>

		<jdk.version>1.8</jdk.version>

		<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>

		<project.reporting.outputEncoding>UTF-8</project.reporting.outputEncoding>

		<sparql-generate.version>2.0-SNAPSHOT</sparql-generate.version>

	</properties>

	<dependencies>

<!-- 		<dependency> -->

<!-- 			<groupId>org.topbraid</groupId> -->

<!-- 			<artifactId>shacl</artifactId> -->

<!-- 			<version>1.3.1</version> -->

<!-- 		</dependency> -->

		<dependency>

			<groupId>org.slf4j</groupId>

			<artifactId>slf4j-log4j12</artifactId>

			<version>1.7.25</version>

		</dependency>

		<dependency>

			<groupId>com.fasterxml.jackson.dataformat</groupId>

			<artifactId>jackson-dataformat-xml</artifactId>

			<version>2.10.1</version>

		</dependency>

		<dependency>

			<groupId>org.apache.jena</groupId>

			<artifactId>jena-tdb</artifactId>

			<version>3.4.0</version>

		</dependency>

		<dependency>

			<groupId>fr.emse.ci</groupId>

			<artifactId>sparql-generate-jena</artifactId>

			<version>2.0-SNAPSHOT</version>

		</dependency>

		<dependency>

			<groupId>fr.emse.ci</groupId>

			<artifactId>sparql-generate-markdown</artifactId>

			<version>2.0-SNAPSHOT</version>

		</dependency>

		<dependency>

			<!-- see Porcelain https://git-scm.com/book/uz/v2/Appendix-B%3A-Embedding-Git-in-your-Applications-JGit -->

			<groupId>org.eclipse.jgit</groupId>

			<artifactId>org.eclipse.jgit</artifactId>

			<version>5.2.1.201812262042-r</version>

		</dependency>

		<dependency>

			<groupId>com.google.code.gson</groupId>

			<artifactId>gson</artifactId>

			<version>2.8.2</version>

			<type>jar</type>

		</dependency>

	</dependencies>

	<build>

		<finalName>${project.artifactId}</finalName>

		<plugins>

			<plugin>

				<groupId>org.apache.maven.plugins</groupId>

				<artifactId>maven-shade-plugin</artifactId>

				<version>2.4.1</version>

				<executions>

					<execution>

						<phase>package</phase>

						<goals>

							<goal>shade</goal>

						</goals>

						<configuration>

							<transformers>

								<transformer

									implementation="org.apache.maven.plugins.shade.resource.ManifestResourceTransformer">

									<mainClass>fr.emse.gitlab.saref.Main

									</mainClass>

								</transformer>

							</transformers>

							<filters>

								<filter>

									<artifact>*:*</artifact>

									<excludes>

										<exclude>META-INF/*.SF</exclude>

										<exclude>META-INF/*.DSA</exclude>

										<exclude>META-INF/*.RSA</exclude>

									</excludes>

								</filter>

							</filters>

						</configuration>

					</execution>

				</executions>

			</plugin>

		</plugins>

	</build>

</project>

 No newline at end of file

package fr.emse.gitlab.saref;

import java.awt.Desktop;

import java.io.File;

import java.io.IOException;

import java.io.StringWriter;

import java.net.URI;

import java.net.URISyntaxException;

import java.net.URLEncoder;

import javax.xml.bind.JAXBContext;

import javax.xml.bind.JAXBException;

import javax.xml.bind.Marshaller;

import org.apache.commons.io.FileUtils;

import org.apache.log4j.Layout;

import org.apache.log4j.PatternLayout;

import org.slf4j.Logger;

import org.slf4j.LoggerFactory;

import fr.emse.gitlab.saref.entities.TestSuites;

import fr.emse.gitlab.saref.jobs.JobRunner;

import fr.emse.gitlab.saref.jobs.library.ReadOntologies;

import fr.emse.gitlab.saref.jobs.library.RepositoryStructureChecker;

import fr.emse.gitlab.saref.utils.SAREF;

public class Main {

	static final Logger LOG = LoggerFactory.getLogger(Main.class);

	private static final Layout LAYOUT = new PatternLayout("%d{mm:ss,SSS} %t %-5p %c:%L - %m%n");

	private static final org.apache.log4j.Logger ROOT_LOGGER = org.apache.log4j.Logger.getRootLogger();

	private static TestSuites testSuites = new TestSuites();

	private static File directory;

	private static File target;

	public static void main(String[] args) throws IOException, InterruptedException, URISyntaxException, JAXBException {

		if (args.length == 0) {

			directory = new File("").getAbsoluteFile();

		} else if (args.length > 1) {

			throw new IllegalArgumentException(

					"Expecting at most one argument: the location of the SAREF directory where to run the pipeline");

		} else {

			directory = new File(args[0]).getAbsoluteFile();

		}

		target = new File(directory, "target");

		FileUtils.forceDelete(target);

		FileUtils.forceMkdir(target);

		File logFile = new File(directory, "target/output.log");

		ROOT_LOGGER.addAppender(new org.apache.log4j.RollingFileAppender(LAYOUT, logFile.getAbsolutePath(), false));

		LOG.info("Starting pipeline");

		JobRunner checker = new RepositoryStructureChecker(directory);

		checker.doJob(testSuites);

		if(testSuites.getErrors() > 0) {

			reportAndExit(-1);

		}

		checker = new ReadOntologies(directory);

		checker.doJob(testSuites);

		reportAndExit(0);

	}

	private static void reportAndExit(int code) {

		try {

			File report = new File(target, "report_output.xml");

			JAXBContext jaxbContext = JAXBContext.newInstance(TestSuites.class);

			Marshaller jaxbMarshaller = jaxbContext.createMarshaller();

			jaxbMarshaller.setProperty(Marshaller.JAXB_FORMATTED_OUTPUT, Boolean.TRUE);

			jaxbMarshaller.marshal(testSuites, report);

			jaxbMarshaller.marshal(testSuites, System.out);

			final StringWriter sw = new StringWriter();

			jaxbMarshaller.marshal(testSuites, sw);

			if (Desktop.isDesktopSupported() && Desktop.getDesktop().isSupported(Desktop.Action.BROWSE)) {

			    Desktop.getDesktop().browse(new URI(SAREF.BASE + "report.html?report=" + URLEncoder.encode(sw.toString(), "UTF-8")));

			}

		} catch(JAXBException | URISyntaxException | IOException ex) {

			LOG.error("Exception:", ex);

			ex.printStackTrace();

		}

 		System.exit(code);

	}

	// private static void testRead() {

	// try {

	// JAXBContext jaxbContext = JAXBContext.newInstance(TestSuite.class);

	// Unmarshaller jaxbUnmarshaller = jaxbContext.createUnmarshaller();

	//

	// TestCase testCase = (TestCase) jaxbUnmarshaller.unmarshal(target);

	//

	// } catch (JAXBException e) {

	// e.printStackTrace();

	// }

	// }

}