Commit d1a1595b authored by Maxime Lefrançois's avatar Maxime Lefrançois
Browse files

better term documentation

parent 952a67ae
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+77 −3
Original line number Diff line number Diff line
@@ -34,8 +34,16 @@ import org.apache.jena.query.Dataset;
import org.apache.jena.query.DatasetFactory;
import org.apache.jena.query.QueryExecutionFactory;
import org.apache.jena.rdf.model.Model;
import org.apache.jena.rdf.model.ModelFactory;
import org.apache.jena.rdf.model.Property;
import org.apache.jena.rdf.model.Resource;
import org.apache.jena.vocabulary.OWL2;
import org.apache.jena.vocabulary.RDF;
import org.apache.jena.vocabulary.RDFS;
import org.semanticweb.owlapi.model.OWLAnnotationValue;
import org.semanticweb.owlapi.model.OWLLiteral;
import org.semanticweb.owlapi.model.OWLOntology;
import org.semanticweb.owlapi.model.parameters.Imports;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;

@@ -130,10 +138,76 @@ public class TermSiteManager extends SAREFRepositoryErrorLogger {
		Dataset dataset = DatasetFactory.create();
		dataset.addNamedModel(term.getIRI(), term.getModel());
		SAREFVersion lastVersion = term.getRepository().getVersions().lastEntry().getValue();
		dataset.addNamedModel(lastVersion.getIRI(), lastVersion.getModel());
		term.getIsDefinedBy().forEach(version->{
			dataset.addNamedModel(version.getIRI(), version.getModel());
		Model lastVersionModel = ModelFactory.createDefaultModel();
		lastVersionModel.add(lastVersion.getModel());
		OWLOntology ontology = ontologyManager.loadOntology(lastVersion, errorLogger);
		ontology.classesInSignature(Imports.INCLUDED).forEach(c->{
			if(ontology.isDeclared(c)) {
				return;
			}
			Resource r = lastVersionModel.getResource(c.getIRI().toString());
			lastVersionModel.add(r, RDF.type, OWL2.Class);
			ontology.annotationAssertionAxioms(c.getIRI(), Imports.INCLUDED).forEach(axiom->{
				Property p = lastVersionModel.getProperty(axiom.getProperty().getIRI().toString());
				OWLAnnotationValue value = axiom.getValue();
				if(value instanceof OWLLiteral) {
					OWLLiteral literal = (OWLLiteral) value;
					lastVersionModel.add(r, p, literal.getLiteral());
				}
				
			});;
		});		
		ontology.objectPropertiesInSignature(Imports.INCLUDED).forEach(op->{
			if(ontology.isDeclared(op)) {
				return;
			}
			Resource r = lastVersionModel.getResource(op.getIRI().toString());
			lastVersionModel.add(r, RDF.type, OWL2.ObjectProperty);
			ontology.annotationAssertionAxioms(op.getIRI(), Imports.INCLUDED).forEach(axiom->{
				Property p = lastVersionModel.getProperty(axiom.getProperty().getIRI().toString());
				OWLAnnotationValue value = axiom.getValue();
				if(value instanceof OWLLiteral) {
					OWLLiteral literal = (OWLLiteral) value;
					lastVersionModel.add(r, p, literal.getLiteral());
				}
				
			});;
		});
		ontology.dataPropertiesInSignature(Imports.INCLUDED).forEach(dp->{
			if(ontology.isDeclared(dp)) {
				return;
			}
			Resource r = lastVersionModel.getResource(dp.getIRI().toString());
			lastVersionModel.add(r, RDF.type, OWL2.DatatypeProperty);
			ontology.annotationAssertionAxioms(dp.getIRI(), Imports.INCLUDED).forEach(axiom->{
				Property p = lastVersionModel.getProperty(axiom.getProperty().getIRI().toString());
				OWLAnnotationValue value = axiom.getValue();
				if(value instanceof OWLLiteral) {
					OWLLiteral literal = (OWLLiteral) value;
					lastVersionModel.add(r, p, literal.getLiteral());
				}
				
			});;
		});
		ontology.individualsInSignature(Imports.INCLUDED).forEach(i->{
			if(ontology.isDeclared(i)) {
				return;
			}
			Resource r = lastVersionModel.getResource(i.getIRI().toString());
			lastVersionModel.add(r, RDF.type, OWL2.NamedIndividual);
			ontology.annotationAssertionAxioms(i.getIRI(), Imports.INCLUDED).forEach(axiom->{
				Property p = lastVersionModel.getProperty(axiom.getProperty().getIRI().toString());
				OWLAnnotationValue value = axiom.getValue();
				if(value instanceof OWLLiteral) {
					OWLLiteral literal = (OWLLiteral) value;
					lastVersionModel.add(r, p, literal.getLiteral());
				}
				
			});;
		});
		
		dataset.addNamedModel(lastVersion.getIRI(), lastVersionModel);
		
		String htmlFileName = String.format("%s.html", term.getLocalName());
		File file = new File(ontoDir, htmlFileName);
		try (IndentedWriter writer = new IndentedWriter(new FileOutputStream(file))) {
+5 −3
Original line number Diff line number Diff line
@@ -59,15 +59,17 @@ TEMPLATE <term/propertyDescription.rqg>( ?property ) {

  # named data property
  TEMPLATE {
    "<a href='{?property}' title='{?property}'>{fun:prefixedIRI(?property)}</a>"
    "<a href='{ ?property }' title='{ st:call-template( <ontology/label.rqg>, ?onto,  ?property ) }: {?commentStr}'>{fun:prefixedIRI(?property)}</a>"
    "<sup title='{ fun:property(<en.properties>, 'dataproperty') }' class='type-dp'>dp</sup>"
  }
  WHERE {
    FILTER(ISURI(?property))
    ?property a owl:DatatypeProperty
    OPTIONAL { ?property rdfs:comment ?comment }
    FILTER (?property != owl:topDataProperty)
    FILTER (?property != owl:bottomDataProperty)
  } .
    BIND( IF(BOUND(?comment), ?comment, "<<no comment>>") AS ?commentStr )
  } LIMIT 1 .

  # universal data property
  TEMPLATE {